STRINGSTRING
JNB_20008 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_20008" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_20008Uncharacterized protein (214 aa)    
Predicted Functional Partners:
dxr
2-C-methyl-D-erythritol 4-phosphate synthase ; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) (396 aa)
              0.783
JNB_20013
Putative acyl-CoA hydrolase (165 aa)
              0.783
JNB_12029
Uncharacterized protein (311 aa)
   
          0.675
JNB_20023
Zinc metalloprotease (454 aa)
              0.669
JNB_20003
Uncharacterized protein (114 aa)
              0.662
JNB_19998
Guanyl-specific ribonuclease SA (162 aa)
              0.662
JNB_13868
Putative hydrolase (301 aa)
   
          0.612
JNB_19993
Uncharacterized protein (424 aa)
              0.607
JNB_14323
Uncharacterized protein (173 aa)
   
          0.561
JNB_09614
Uncharacterized protein (261 aa)
   
          0.522
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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