STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39093.1Outer membrane protein. (418 aa)    
Predicted Functional Partners:
EAQ38259.1
Hypothetical protein; NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.724
EAQ38750.1
Hypothetical protein.
  
 0.710
EAQ39092.3
Hypothetical protein.
      
0.603
EAQ39909.1
Peptidase family M50; Predicted membrane-associated Zn-dependent proteases 1.
  
  
 0.536
EAQ39094.1
Hypothetical protein.
       0.529
EAQ39091.1
Hypothetical protein.
       0.494
lon
ATP-dependent Lon protease, bacterial type.
  
 
 0.448
EAQ39469.1
Ras family protein; GTPase SAR1 and related small G proteins.
    
  0.445
lpxC
UDP-3-O-acyl-N-acetylglucosamine deacetylase.
  
  
 0.413
EAQ40246.1
DnaJ-class molecular chaperone with C-terminal Zn finger domain.
    
  0.403
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.