STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39108.1Hypothetical protein; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases. (275 aa)    
Predicted Functional Partners:
EAQ39109.1
Hypothetical protein.
 
     0.952
EAQ39114.1
Uncharacterized homolog of gamma- carboxymuconolactone decarboxylase subunit.
     0.928
EAQ39110.2
Hypothetical protein.
 
    0.891
susC13
TonB dependent/ligand-gated channel; Outer membrane receptor proteins, mostly Fe transport.
 
     0.874
EAQ38354.1
Hypothetical protein; FOG: Ankyrin repeat.
  
 
  0.694
EAQ40095.1
Ham1 family protein; Xanthosine triphosphate pyrophosphatase.
  
  
 0.616
EAQ40212.2
Hypothetical protein.
    
  0.593
EAQ40448.1
Hypothetical protein; FOG: Ankyrin repeat.
    
  0.593
EAQ39454.1
Hypothetical protein; FOG: Ankyrin repeat.
    
  0.593
EAQ39625.1
Hypothetical protein.
    
  0.593
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.