STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39199.1Putative copper/silver resistance-related permease; Cation/multidrug efflux pump. (1082 aa)    
Predicted Functional Partners:
EAQ39198.1
Efflux transporter, RND family, MFP subunit; Membrane-fusion protein.
 
 0.983
tolC
Outer membrane protein.
 0.963
EAQ39200.1
Hypothetical protein.
       0.773
EAQ39307.2
Efflux transporter, RND family, MFP subunit; Membrane-fusion protein.
 
 0.764
EAQ39171.1
Hypothetical protein.
  
 0.700
EAQ40414.1
Hypothetical protein.
  
 0.700
EAQ40417.1
Efflux transporter, RND family, MFP subunit; Membrane-fusion protein.
 
 0.700
EAQ38533.1
Efflux transporter, RND family, MFP subunit; Membrane-fusion protein.
  
 0.700
AIN49931.1
Hypothetical protein.
       0.570
EAQ40075.3
Preprotein translocase subunit YajC.
    
 
 0.505
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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