STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39250.1Hypothetical protein. (65 aa)    
Predicted Functional Partners:
EAQ39252.1
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
       0.825
EAQ39253.1
Mn2+ and Fe2+ transporters of the NRAMP family.
 
     0.822
EAQ39251.1
Glycosyltransferases, probably involved in cell wall biogenesis.
       0.802
EAQ40297.1
Hypothetical protein.
  
     0.734
tonB1
Periplasmic protein TonB.
  
     0.728
EAQ39118.1
Hypothetical protein; FOG: TPR repeat.
  
     0.723
EAQ39221.1
Biopolymer transport protein.
  
     0.695
EAQ38267.1
Biopolymer transport protein.
  
     0.683
EAQ39249.1
Hypothetical protein.
       0.634
EAQ37873.1
Hypothetical protein.
  
     0.631
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.