STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38738.1Hypothetical protein. (289 aa)    
Predicted Functional Partners:
ribD
Riboflavin biosynthesis protein RibD; Pyrimidine deaminase.
       0.840
hemK
Methyltransferase, HemK family; Methylase of polypeptide chain release factors.
       0.600
AIN49926.1
GCN5-related N-acetyltransferase.
       0.600
bioB
Biotin synthase and related enzymes.
  
    0.547
EAQ38332.1
Hypothetical protein.
  
     0.508
EAQ37885.1
Hypothetical protein.
  
     0.489
EAQ38742.1
UPF0717 protein; Predicted Rossmann fold nucleotide-binding protein.
       0.475
EAQ38737.1
Hypothetical protein.
       0.450
susC57
TonB dependent/ligand-gated channel; Outer membrane receptor proteins, mostly Fe transport.
  
     0.423
EAQ39615.2
Hypothetical protein.
  
     0.422
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.