STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysScysteine-tRNA ligase; Cysteinyl-tRNA synthetase. (494 aa)    
Predicted Functional Partners:
cysE1
Serine acetyltransferase.
 
  
 0.945
cysM
Cysteine synthase.
  
 
 0.917
EAQ38783.1
Hypothetical protein.
       0.836
cysE3
Serine acetyltransferase.
 
  
 0.797
thrS
threonyl-tRNA synthetase.
 
  
 0.791
tpiA
Triosephosphate isomerase.
 
 
  
 0.771
argS
arginine-tRNA ligase; Arginyl-tRNA synthetase.
 
 
 0.744
metS
methionyl-tRNA synthetase.
 
  
 0.706
EAQ37954.1
Cystathionine beta-synthase; Cysteine synthase.
  
 
 0.694
leuS
leucyl-tRNA synthetase.
 
 
 0.665
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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