STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38848.1Rhs family protein. (2159 aa)    
Predicted Functional Partners:
EAQ37809.1
Glycosyltransferases, probably involved in cell wall biogenesis.
  
     0.731
EAQ39806.3
Hypothetical protein.
  
     0.721
EAQ39656.1
OmpA family protein; Flagellar motor protein.
  
 
  0.684
EAQ37807.1
Hypothetical protein.
  
    0.684
EAQ38515.1
Hypothetical protein.
  
     0.635
EAQ37808.1
Glycosyltransferase.
  
     0.629
EAQ40037.1
Hypothetical protein.
  
     0.614
EAQ37803.2
Glycosyltransferase.
  
     0.612
EAQ37813.1
Glycosyltransferase.
  
     0.593
EAQ39170.1
Hypothetical protein.
  
     0.568
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.