STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38883.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
EAQ38254.1
Ribonucleoside-diphosphate reductase large chain; Ribonucleotide reductase, alpha subunit.
   
 0.959
EAQ38925.2
Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis).
  
  
 0.700
dnaN1
DNA polymerase sliding clamp subunit (PCNA homolog).
   
 
 0.653
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; dUTPase.
   
  
 0.586
polA
DNA polymerase I - 3'-5' exonuclease and polymerase domains.
  
 0.584
thyA
Thymidylate synthase.
   
  
 0.556
EAQ40054.1
SPFH/band 7 family protein; Membrane protease subunits, stomatin/prohibitin homologs.
   
    0.491
EAQ39671.1
Hypothetical protein; Membrane protease subunits, stomatin/prohibitin homologs.
   
    0.491
tdk
Thymidine kinase.
   
  
 0.485
menC
O-succinylbenzoate synthase.
       0.419
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.