STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38382.1OmpA family protein; Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (287 aa)    
Predicted Functional Partners:
EAQ38816.1
Two-component system sensor histidine kinase; Methylase of chemotaxis methyl-accepting proteins.
  
  
 0.925
EAQ39441.1
OmpA family protein; Flagellar motor protein.
  
  
 
0.921
EAQ39343.1
OmpA family protein; Flagellar motor protein.
  
  
 
0.914
EAQ40057.1
Type VI secretion system OmpA/MotB family protein; Flagellar motor protein.
  
  0.605
EAQ38383.1
Predicted glycosyltransferases.
       0.593
EAQ38629.1
Hypothetical protein.
  
  
 0.592
EAQ39323.2
OmpA family protein; Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
  0.586
EAQ39371.1
OmpA family protein; Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 0.506
AIN49936.1
OmpA family protein; Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 0.491
EAQ38956.2
OmpA family protein; Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 0.486
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.