STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38393.1Putative iron-sulfur-binding reductase; Fe-S oxidoreductase. (263 aa)    
Predicted Functional Partners:
EAQ38390.1
Putative iron-sulfur-binding reductase; Fe-S oxidoreductase.
   
 0.994
EAQ38389.1
ABC transporter, periplasmic binding protein; ABC-type transport system involved in resistance to organic solvents, periplasmic component.
       0.720
EAQ38392.1
Hypothetical protein.
       0.712
EAQ39239.1
Hypothetical protein.
  
 
 0.683
EAQ38391.1
Hypothetical protein.
       0.671
EAQ38394.1
Hypothetical protein.
     
 0.648
etfA
Electron transfer flavoprotein, alpha subunit.
 
  
 0.623
etfB
Electron transfer flavoprotein, beta subunit.
 
  
 0.622
amiA
N-acetylmuramoyl-L-alanine amidase.
       0.533
EAQ38398.1
FAD linked oxidase-like protein; FAD/FMN-containing dehydrogenases.
 
 0.487
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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