STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38437.1Transcriptional regulator, effector-binding domain/component. (343 aa)    
Predicted Functional Partners:
crcB
Integral membrane protein possibly involved in chromosome condensation.
       0.801
EAQ39054.1
Hypothetical protein.
  
     0.729
EAQ39735.1
Hypothetical protein; FOG: TPR repeat.
  
     0.719
EAQ39708.2
Hypothetical protein.
  
     0.695
EAQ37881.1
Hypothetical protein.
  
     0.684
EAQ39806.3
Hypothetical protein.
  
     0.664
EAQ38438.1
Peptidase family M49.
 
     0.641
EAQ38491.3
Hypothetical protein.
  
     0.641
EAQ39220.1
Hypothetical protein.
  
     0.600
EAQ40344.1
Hypothetical protein.
  
     0.587
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.