STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38442.1Serine protease, subtilase family; Subtilisin-like serine proteases. (537 aa)    
Predicted Functional Partners:
EAQ38443.1
2-nitropropane dioxygenase-related protein; Dioxygenases related to 2-nitropropane dioxygenase.
       0.797
trmU
Predicted tRNA(5-methylaminomethyl-2- thiouridylate) methyltransferase, contains the PP-loop ATPase domain.
       0.675
EAQ40395.1
Parvulin-like peptidyl-prolyl isomerase.
  
 
 
 0.485
EAQ38440.1
Uncharacterized protein conserved in bacteria.
 
     0.482
EAQ40224.1
Hypothetical protein.
   
 
 0.472
gmk
Guanylate kinase.
    
  0.440
EAQ38502.1
Cytochrome P450.
   
 0.422
EAQ39808.2
Hypothetical protein; Predicted periplasmic ligand-binding sensor domain.
  
     0.411
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.