STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38463.1ABC transporter, ATP-binding protein. (264 aa)    
Predicted Functional Partners:
EAQ38464.1
ABC-type Fe3+-siderophore transport system, permease component.
 0.999
EAQ38465.2
Fe3+-specific periplasmic binding protein; ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.993
EAQ38480.1
ABC transporter, ATP-binding protein; ABC-type oligopeptide transport system, ATPase component.
 
 
0.882
fecB
Fe3+-binding periplasmic protein; ABC-type Fe3+-hydroxamate transport system, periplasmic component.
  
 0.875
EAQ38462.3
Hypothetical protein.
       0.773
EAQ39900.1
ABC transporter, ATP-binding protein; ABC-type sugar transport systems, ATPase components.
 
  
0.602
EAQ39902.1
ABC-type Mn2+/Zn2+ transport systems, permease components.
   
 0.599
EAQ39903.1
ABC-type Mn2+/Zn2+ transport systems, permease components.
   
 0.597
EAQ37851.1
ABC transporter, periplasmic binding protein; ABC-type dipeptide transport system, periplasmic component.
     
 0.584
EAQ38461.1
DNA recombination protein RmuC; Uncharacterized protein conserved in bacteria.
       0.575
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.