STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39940.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
gldD
Gliding motility protein GldD.
  
     0.755
gldJ3
Gliding motility protein GldJ.
  
     0.741
gldB
Gliding motility protein GldB.
  
     0.733
clpS
ATP-dependent Clp protease adaptor protein ClpS.
  
     0.715
EAQ37836.1
Hypothetical protein.
  
     0.675
EAQ39719.2
Hypothetical protein.
  
     0.665
EAQ39308.1
Outer membrane protein.
  
     0.655
EAQ37880.1
Uncharacterized protein conserved in bacteria.
 
     0.647
EAQ39370.1
Hypothetical protein.
  
     0.646
AIN49953.1
Hypothetical protein; FOG: TPR repeat.
  
     0.640
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.