STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39952.3Hypothetical protein. (161 aa)    
Predicted Functional Partners:
EAQ39951.1
Hypothetical protein.
 
     0.847
EAQ39950.1
Hypothetical protein.
       0.718
EAQ38674.1
Hypothetical protein.
  
     0.682
EAQ40554.1
Hypothetical protein.
  
     0.679
EAQ39183.1
Hypothetical protein.
  
     0.657
susC9
TonB dependent/ligand-gated channel; Outer membrane receptor proteins, mostly Fe transport.
       0.617
EAQ40365.1
Hypothetical protein.
  
     0.615
EAQ38644.1
Hypothetical protein.
  
     0.614
EAQ39953.1
Hypothetical protein.
       0.556
EAQ38257.1
Hypothetical protein.
  
     0.556
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.