STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39997.1Uncharacterized membrane protein. (327 aa)    
Predicted Functional Partners:
EAQ39994.1
Hypothetical protein.
     0.969
EAQ39995.1
Hypothetical protein.
 
     0.958
EAQ39992.1
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
  
 0.950
EAQ39996.1
Hypothetical protein.
 
     0.947
EAQ39998.1
RDD family protein; Predicted membrane protein/domain.
 
    0.939
EAQ39993.1
MoxR-like ATPases.
 
    0.844
EAQ39999.1
Predicted membrane protein.
       0.615
purB
Adenylosuccinate lyase; Fumarase.
       0.543
EAQ37651.1
Metal dependent phosphohydrolase; Predicted HD superfamily hydrolase.
  
     0.416
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.