STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppk3Polyphosphate kinase. (684 aa)    
Predicted Functional Partners:
ppk1
Polyphosphate kinase.
  
  
 
0.912
ppa
Inorganic pyrophosphatase.
     
 0.910
ppx
Exopolyphosphatase.
 
  
 0.893
EAQ40013.1
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
       0.773
EAQ37767.1
Polyphosphate kinase 2.
 
   
 0.724
udp
Purine-nucleoside phosphorylase.
       0.539
EAQ40016.1
Hypothetical protein.
       0.529
polA
DNA polymerase I - 3'-5' exonuclease and polymerase domains.
  
  
 0.463
EAQ40017.1
Translation initiation factor 1 (eIF-1/SUI1) and related proteins.
       0.460
EAQ40018.1
2OG-Fe(II) oxygenase superfamily protein; Isopenicillin N synthase and related dioxygenases.
       0.460
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.