STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ40069.2Endoribonuclease L-PSP; Putative translation initiation inhibitor, yjgF family. (162 aa)    
Predicted Functional Partners:
EAQ38073.1
Endoribonuclease L-PSP; Putative translation initiation inhibitor, yjgF family.
  
     0.769
EAQ40070.1
Hypothetical protein.
       0.655
EAQ40068.1
Hypothetical protein; Predicted ATPase.
  
    0.545
EAQ40066.1
Hypothetical protein; Mannose-6-phosphate isomerase.
  
    0.471
EAQ40065.1
Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
    0.462
fusA
Translation elongation factors (GTPases).
    
  0.461
EAQ40067.1
Hypothetical protein.
       0.452
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.