STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ40090.1Hypothetical protein. (193 aa)    
Predicted Functional Partners:
EAQ40091.1
Sir2 family protein; NAD-dependent protein deacetylases, SIR2 family.
       0.779
EAQ40141.1
Hypothetical protein.
  
     0.662
EAQ38139.1
Hypothetical protein.
  
     0.623
EAQ40374.1
Hypothetical protein.
  
     0.598
AIN49954.1
Putative membrane protein.
  
     0.596
EAQ39249.1
Hypothetical protein.
  
     0.594
EAQ37778.1
Hypothetical protein.
  
     0.592
EAQ39467.1
Hypothetical protein.
  
     0.557
EAQ37779.1
Hypothetical protein.
  
     0.556
EAQ40092.1
SpoU rRNA methylase family protein; rRNA methylases.
       0.553
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.