STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ40227.1NAD-dependent aldehyde dehydrogenases. (465 aa)    
Predicted Functional Partners:
sdhA
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
   
 0.929
sdhB
Succinate dehydrogenase/fumarate reductase, Fe- S protein subunit.
   
 
 0.913
EAQ39985.1
NAD-dependent aldehyde dehydrogenases.
  
  
 
0.909
sdhC
Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
   
 
  0.900
fmt
methionyl-tRNA formyltransferase.
 
    
 0.900
gltA
Citrate synthase.
  
 0.869
pckA
Phosphoenolpyruvate carboxykinase (ATP).
  
 
 0.866
fumC
Fumarate hydratase class II; Fumarase.
   
 0.835
mqo
Malate dehydrogenase (quinone); Predicted dehydrogenase.
   
 
 0.832
sucA
2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
   
 
 0.827
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.