STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ40265.1Predicted amidohydrolase. (508 aa)    
Predicted Functional Partners:
EAQ40262.1
Arginase family protein; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family.
  
 0.832
dhys
Deoxyhypusine synthase.
       0.795
EAQ40264.1
Hypothetical protein.
       0.773
EAQ40261.1
Diaminopimelate decarboxylase.
     
 0.718
guaA
GMP synthase, PP-ATPase domain/subunit.
   
 
 0.417
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.