STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ40270.1Polysaccharide biosynthesis protein; Predicted nucleoside-diphosphate sugar epimerases. (668 aa)    
Predicted Functional Partners:
EAQ40271.2
DegT/DnrJ/EryC1/StrS aminotransferase family protein; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis.
  
 0.989
EAQ40274.1
Sugar transferases involved in lipopolysaccharide synthesis.
  
 0.938
EAQ40272.1
Sugar transferases involved in lipopolysaccharide synthesis.
  
 0.936
EAQ40268.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.933
EAQ40269.1
Periplasmic protein involved in polysaccharide export.
  
  
 0.902
EAQ38958.2
DegT/DnrJ/EryC1/StrS aminotransferase family protein.
  
 0.884
EAQ37638.1
DegT/DnrJ/EryC1/StrS aminotransferase family protein; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis.
  
 0.863
EAQ37797.1
Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.858
EAQ40273.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; Acetyltransferase (isoleucine patch superfamily).
 
     0.790
EAQ40275.1
Glycosyl transferases group 1; Glycosyltransferase.
 
  
 0.790
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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