STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ40284.1Nucleoside-diphosphate-sugar epimerases. (335 aa)    
Predicted Functional Partners:
EAQ40283.1
Predicted UDP-glucose 6-dehydrogenase.
 0.978
EAQ40290.1
Predicted UDP-glucose 6-dehydrogenase.
  
 0.920
rfbC
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes.
  
  
 0.849
rfbD
dTDP-4-dehydrorhamnose reductase.
  
 
 0.844
EAQ37808.1
Glycosyltransferase.
   
 
  0.820
rfbB
dTDP-D-glucose 4,6-dehydratase.
 
  
0.818
rmlA
Glucose-1-phosphate thymidylyltransferase; dTDP-glucose pyrophosphorylase.
  
  
 0.811
EAQ40285.1
Inositol monophosphatase family protein; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'- phosphatase.
  
    0.771
rpsN
Ribosomal protein S14.
   
  0.726
rpsL
Ribosomal protein S12.
   
 0.719
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.