STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ40413.1Outer membrane protein. (406 aa)    
Predicted Functional Partners:
EAQ40412.1
Putative copper/silver resistance-related permease; Cation/multidrug efflux pump.
  
 0.980
EAQ40417.1
Efflux transporter, RND family, MFP subunit; Membrane-fusion protein.
 
 0.973
EAQ40414.1
Hypothetical protein.
 
 0.970
EAQ40411.2
Hypothetical protein.
 
     0.887
EAQ39171.1
Hypothetical protein.
 
 0.883
EAQ40416.1
Hypothetical protein.
 
     0.833
EAQ39148.1
HlyD family secretion protein.
 
 0.807
EAQ38535.1
Efflux transporter, RND family, MFP subunit; Membrane-fusion protein.
  
 0.776
EAQ40415.1
Putative heavy metal transport/detoxification protein; Cation transport ATPase.
  
  
 0.759
EAQ39174.2
Hypothetical protein.
 
     0.734
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.