STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ40502.1GTP-dependent nucleic acid-binding protein; Predicted GTPase, probable translation factor. (364 aa)    
Predicted Functional Partners:
ltaA
Threonine aldolase.
      0.869
pth
peptidyl-tRNA hydrolase.
 
  
 0.796
guaA
GMP synthase, PP-ATPase domain/subunit.
  
  
 0.786
lepA
GTP-binding protein LepA; Membrane GTPase LepA.
 
  
 0.776
pheT
Phenylalanyl-tRNA synthetase beta subunit.
  
  
 0.763
metS
methionyl-tRNA synthetase.
  
  
 0.753
argS
arginine-tRNA ligase; Arginyl-tRNA synthetase.
 
  
 0.738
prfA
Protein chain release factor A.
 
  
 0.724
rpsG
Ribosomal protein S7.
  
 
 0.654
gltX
Glutamyl- and glutaminyl-tRNA synthetases.
 
  
 0.644
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.