STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ40509.1Hypothetical protein. (60 aa)    
Predicted Functional Partners:
EAQ38337.1
Organic solvent tolerance protein OstA.
  
     0.692
AIN49934.1
Hypothetical protein.
  
     0.652
fumC
Fumarate hydratase class II; Fumarase.
       0.595
EAQ37778.1
Hypothetical protein.
  
     0.575
EAQ38830.2
Hypothetical protein.
  
     0.566
EAQ37836.1
Hypothetical protein.
  
     0.557
EAQ38125.2
Hypothetical protein.
  
     0.528
EAQ40090.1
Hypothetical protein.
  
     0.511
EAQ39215.3
Peptidase.
  
     0.495
AIN49906.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.