STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39428.1ATP synthase, delta/epsilon subunit. (92 aa)    
Predicted Functional Partners:
atpD
F0F1-type ATP synthase, beta subunit.
 
 0.999
atpB
F0F1-type ATP synthase, subunit a.
  
 0.999
atpE
ATP synthase, C subunit.
 
 0.999
atpF
F0F1-type ATP synthase, subunit b.
  
 0.999
EAQ39726.1
F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein).
 
 0.999
atpA
F0F1-type ATP synthase, alpha subunit.
  
 0.999
atpG
F0F1-type ATP synthase, gamma subunit.
  
 0.999
ppa
Inorganic pyrophosphatase.
   
 
  0.915
EAQ39957.3
Hypothetical protein; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit.
  
 
 0.847
rplQ
Ribosomal protein L17.
   
    0.827
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.