Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ37783.1 | EAQ38717.1 | MED134_13516 | MED134_01940 | Hypothetical protein. | Hypothetical protein. | 0.619 |
EAQ37783.1 | EAQ39336.2 | MED134_13516 | MED134_07596 | Hypothetical protein. | Outer membrane protein/protective antigen OMA87. | 0.634 |
EAQ37783.1 | EAQ39457.1 | MED134_13516 | MED134_08201 | Hypothetical protein. | Hypothetical protein. | 0.770 |
EAQ37783.1 | rpoZ | MED134_13516 | MED134_02110 | Hypothetical protein. | DNA-directed RNA polymerase, omega subunit. | 0.589 |
EAQ38485.1 | EAQ38717.1 | MED134_11331 | MED134_01940 | Hypothetical protein. | Hypothetical protein. | 0.604 |
EAQ38485.1 | EAQ39117.2 | MED134_11331 | MED134_00820 | Hypothetical protein. | Hypothetical protein. | 0.489 |
EAQ38485.1 | EAQ39336.2 | MED134_11331 | MED134_07596 | Hypothetical protein. | Outer membrane protein/protective antigen OMA87. | 0.712 |
EAQ38485.1 | EAQ39457.1 | MED134_11331 | MED134_08201 | Hypothetical protein. | Hypothetical protein. | 0.577 |
EAQ38485.1 | EAQ40004.1 | MED134_11331 | MED134_04604 | Hypothetical protein. | Predicted membrane protein. | 0.739 |
EAQ38485.1 | rpoZ | MED134_11331 | MED134_02110 | Hypothetical protein. | DNA-directed RNA polymerase, omega subunit. | 0.410 |
EAQ38717.1 | EAQ37783.1 | MED134_01940 | MED134_13516 | Hypothetical protein. | Hypothetical protein. | 0.619 |
EAQ38717.1 | EAQ38485.1 | MED134_01940 | MED134_11331 | Hypothetical protein. | Hypothetical protein. | 0.604 |
EAQ38717.1 | EAQ38927.1 | MED134_01940 | MED134_02990 | Hypothetical protein. | Hypothetical protein. | 0.631 |
EAQ38717.1 | EAQ39336.2 | MED134_01940 | MED134_07596 | Hypothetical protein. | Outer membrane protein/protective antigen OMA87. | 0.448 |
EAQ38717.1 | EAQ39457.1 | MED134_01940 | MED134_08201 | Hypothetical protein. | Hypothetical protein. | 0.657 |
EAQ38717.1 | EAQ40004.1 | MED134_01940 | MED134_04604 | Hypothetical protein. | Predicted membrane protein. | 0.455 |
EAQ38717.1 | rpoZ | MED134_01940 | MED134_02110 | Hypothetical protein. | DNA-directed RNA polymerase, omega subunit. | 0.592 |
EAQ38805.1 | EAQ38927.1 | MED134_02380 | MED134_02990 | Sigma-54 modulation protein; Ribosome-associated protein Y (PSrp-1). | Hypothetical protein. | 0.600 |
EAQ38805.1 | EAQ39457.1 | MED134_02380 | MED134_08201 | Sigma-54 modulation protein; Ribosome-associated protein Y (PSrp-1). | Hypothetical protein. | 0.615 |
EAQ38805.1 | EAQ40004.1 | MED134_02380 | MED134_04604 | Sigma-54 modulation protein; Ribosome-associated protein Y (PSrp-1). | Predicted membrane protein. | 0.452 |
page 1 of 4