STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39481.1Predicted membrane protein. (144 aa)    
Predicted Functional Partners:
serA3
Phosphoglycerate dehydrogenase and related dehydrogenases.
      0.804
EAQ39482.1
Hypothetical protein; Lactoylglutathione lyase and related lyases.
       0.612
EAQ39479.1
Glutamate decarboxylase and related PLP- dependent proteins.
       0.539
EAQ39480.1
Transcription regulator, ArsR family; Predicted transcriptional regulators.
       0.539
EAQ39483.1
Hypothetical protein.
       0.539
EAQ39485.1
Hypothetical protein.
       0.494
EAQ39486.1
Hypothetical protein; Mannose-6-phosphate isomerase.
       0.493
EAQ38869.1
Hypothetical protein.
  
     0.466
pfkA
6-phosphofructokinase.
   
    0.438
EAQ40295.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.