STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39505.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
EAQ39507.1
Hypothetical protein.
       0.773
gspD
General secretion pathway protein D; Type II secretory pathway, component HofQ.
       0.773
gspE
General secretion pathway protein E; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
       0.773
EAQ39510.1
Hypothetical protein.
       0.773
AIN49941.1
Putative membrane protein.
       0.773
EAQ39504.1
Phage-related protein, tail component.
       0.765
EAQ39503.1
Hypothetical protein.
       0.763
EAQ39502.1
Hypothetical protein.
       0.762
gspG
General secretion pathway protein G; Type II secretory pathway, pseudopilin PulG.
       0.682
EAQ39512.1
Transposase and inactivated derivatives, IS1 family.
       0.511
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.