STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39592.1ABC transporter, ATP-binding protein; ATPase components of various ABC-type transport systems, contain duplicated ATPase. (562 aa)    
Predicted Functional Partners:
EAQ39134.2
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.999
EAQ37826.1
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.999
EAQ37851.1
ABC transporter, periplasmic binding protein; ABC-type dipeptide transport system, periplasmic component.
 
 
 0.933
ansA3
Asparaginase.
 
  
 0.663
EAQ38480.1
ABC transporter, ATP-binding protein; ABC-type oligopeptide transport system, ATPase component.
  
 
 
0.598
EAQ39255.3
Putative permease YjgP/YjgQ family; Predicted permeases.
     
 0.550
EAQ38952.1
Putative permease YjgP/YjgQ family; Predicted permeases.
     
 0.550
EAQ39144.1
ABC transporter, ATP-binding protein; ABC-type sugar transport systems, ATPase components.
    
 
0.450
gldA
Gliding motility protein GldA; ABC-type sugar transport systems, ATPase components.
   
 
0.450
EAQ39718.2
ABC transporter, ATP-binding protein; ABC-type spermidine/putrescine transport systems, ATPase components.
    
 
0.450
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.