STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39676.1Hypothetical protein; Predicted metal-dependent hydrolase. (135 aa)    
Predicted Functional Partners:
EAQ38048.2
Metallo-beta-lactamase superfamily protein; Zn-dependent hydrolases, including glyoxylases.
  
 0.989
phoH
Phosphate starvation-inducible protein PhoH, predicted ATPase.
  
  
 0.882
sodA
Superoxide dismutase.
   
 
 0.876
gcvP
Glycine cleavage system protein P (pyridoxal- binding), N-terminal domain.
   
    0.833
EAQ39675.1
Phage-related minor tail protein.
  
    0.819
rpsQ
Ribosomal protein S17.
    
 0.815
rplQ
Ribosomal protein L17.
 
 
 
 0.790
era
GTP-binding protein Era; GTPase.
  
  
 0.717
dgkA
Diacylglycerol kinase.
  
  
 0.712
rplK
Ribosomal protein L11.
    
 
 0.702
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.