STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39694.1Glycosyltransferase. (357 aa)    
Predicted Functional Partners:
EAQ39699.1
Glycosyltransferase.
 
     0.907
rfbX
Polysaccharide biosynthesis protein; Membrane protein involved in the export of O- antigen and teichoic acid.
 
    0.892
EAQ39697.1
Glycosyltransferase.
 
     0.880
EAQ39696.1
Lipid A core - O-antigen ligase and related enzymes.
 
    0.876
wcaF
Putative colanic acid biosynthesis acetyltransferase WcaF; Acetyltransferase (isoleucine patch superfamily).
 
    0.825
fcl
GDP-fucose synthetase; Nucleoside-diphosphate-sugar epimerases.
 
    0.824
gmd
GDP-D-mannose dehydratase.
  
  
 0.793
EAQ39692.1
Hypothetical protein.
  
    0.778
EAQ39695.1
Hypothetical protein.
       0.773
EAQ39689.1
Hypothetical protein.
       0.709
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.