STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bacAUndecaprenyl-diphosphatase; Uncharacterized bacitracin resistance protein. (264 aa)    
Predicted Functional Partners:
uppS
Undecaprenyl pyrophosphate synthase.
     
 0.919
mraY
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.
    
 0.918
EAQ38065.1
PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.
  
 
 0.912
EAQ37772.1
PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.
  
 
 0.912
truB
Pseudouridine synthase.
       0.836
EAQ39762.1
Hypothetical protein.
       0.747
ftsX
Cell division protein.
  
    0.719
EAQ39765.1
Hypothetical protein.
       0.641
betA
Choline dehydrogenase and related flavoproteins.
       0.428
EAQ39759.1
Hypothetical protein.
       0.428
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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