STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ansA3Asparaginase. (356 aa)    
Predicted Functional Partners:
asnB
Asparagine synthase (glutamine-hydrolyzing).
     
 0.908
ansA1
L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D.
     
 0.907
purA
Adenylosuccinate synthase.
    
  0.905
EAQ39245.3
Aminotransferase class I and II; Aspartate/tyrosine/aromatic aminotransferase.
    
  0.902
EAQ38012.1
Aminotransferase class I and II; Aspartate/tyrosine/aromatic aminotransferase.
    
  0.902
pyrB
Ornithine carbamoyltransferase.
     
  0.900
argG
Argininosuccinate synthase.
     
  0.900
EAQ39917.1
Arginase family protein; Arginase/agmatinase/formimionoglutamate hydrolase, arginase family.
   
 
  0.803
EAQ38266.1
Predicted amidohydrolase.
   
 
  0.803
thrA
Bifunctional aspartokinase/homoserine dehydrogenase 1; Aspartokinases.
     
  0.800
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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