STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ39864.1Hypothetical protein. (624 aa)    
Predicted Functional Partners:
EAQ39863.1
Peptidase family M20/M25/M40; Acetylornithine deacetylase/Succinyl- diaminopimelate desuccinylase and related deacylases.
       0.671
EAQ37803.2
Glycosyltransferase.
  
     0.589
susC15
TonB dependent/ligand-gated channel; Outer membrane receptor proteins, mostly Fe transport.
  
     0.557
EAQ40437.1
Hypothetical protein.
  
     0.547
AIN49918.1
Hypothetical protein.
 
     
0.477
EAQ38179.1
PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.
  
  0.470
EAQ38329.1
Hypothetical protein.
  
     0.461
EAQ38664.1
Hypothetical protein.
  
  0.453
EAQ38853.1
Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.443
EAQ37807.1
Hypothetical protein.
  
    0.425
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.