STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38266.1Predicted amidohydrolase. (319 aa)    
Predicted Functional Partners:
gdhA
Glutamate dehydrogenase/leucine dehydrogenase.
   
 
 0.923
glnA
Glutamate-ammonia ligase; Glutamine synthetase.
    
 0.913
EAQ38841.1
NAD-dependent aldehyde dehydrogenases.
   
 0.911
EAQ39779.1
NAD-dependent aldehyde dehydrogenases.
   
 0.911
EAQ38343.1
Glutamate-ammonia ligase; Uncharacterized protein related to glutamine synthetase.
     
  0.900
gltD
Glutamate synthase, NADH/NADPH, small subunit; NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 0.830
hppD
4-hydroxyphenylpyruvate dioxygenase and related hemolysins.
   
 0.829
gltS3
Glutamate synthase domain 2.
    
 0.829
EAQ39006.1
NAD-dependent aldehyde dehydrogenases.
   
 0.822
EAQ39245.3
Aminotransferase class I and II; Aspartate/tyrosine/aromatic aminotransferase.
  
 
 0.822
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.