STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38573.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
EAQ38574.1
D-cysteine desulfhydrase family protein.
     0.942
EAQ38575.1
N-acetylmuramidase precursor; Muramidase (flagellum-specific).
       0.802
hemL
Glutamate-1-semialdehyde aminotransferase.
       0.694
EAQ39953.1
Hypothetical protein.
  
     0.532
susC15
TonB dependent/ligand-gated channel; Outer membrane receptor proteins, mostly Fe transport.
  
     0.515
AIN49954.1
Putative membrane protein.
  
     0.474
EAQ39417.1
Hypothetical protein.
  
     0.472
EAQ38176.1
Hypothetical protein.
  
     0.454
EAQ39328.1
Hypothetical protein.
  
     0.442
EAQ40295.1
Hypothetical protein.
  
     0.438
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.