STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38597.1Hypothetical protein. (96 aa)    
Predicted Functional Partners:
EAQ38596.1
Hypothetical protein.
       0.836
EAQ39190.1
Arginase/agmatinase/formimionoglutamate hydrolase, arginase family.
  
     0.706
EAQ38953.3
Outer membrane lipoprotein carrier protein LolA.
  
   
 0.675
EAQ37871.1
ZIP zinc transporter.
  
     0.669
ftsZ
Cell division GTPase.
  
 
 
 0.648
gldO
Gliding motility protein GldO.
  
     0.632
EAQ39332.1
Hypothetical protein.
  
     0.627
EAQ39239.1
Hypothetical protein.
  
     0.621
rnpA
RNase P protein component.
  
     0.582
EAQ37922.1
Hypothetical protein.
  
     0.567
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.