STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argD3Ornithine/acetylornithine aminotransferase. (374 aa)    
Predicted Functional Partners:
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Acetylglutamate semialdehyde dehydrogenase.
 
 
 0.997
argE
Acetylornithine deacetylase/Succinyl- diaminopimelate desuccinylase and related deacylases.
 
 
 0.994
argB
Acetylglutamate kinase.
  
 0.992
argF
Ornithine carbamoyltransferase.
 
 
 0.988
argG
Argininosuccinate synthase.
 
 
 0.980
argH
Argininosuccinate lyase.
 
  
 0.963
argD1
Ornithine/acetylornithine aminotransferase.
  
  
 
0.923
EAQ38600.1
Acetyltransferase (GNAT) family protein; Histone acetyltransferase HPA2 and related acetyltransferases.
 
  
 0.923
dapD
Tetrahydrodipicolinate N-succinyltransferase.
    
 0.911
EAQ37780.1
Peptidase family M23; Membrane proteins related to metalloendopeptidases.
 
  
   0.903
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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