STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38647.1Hypothetical protein. (283 aa)    
Predicted Functional Partners:
EAQ38457.1
Hypothetical protein.
  
     0.750
EAQ38648.1
Hypothetical protein.
  
     0.709
gcvP
Glycine cleavage system protein P (pyridoxal- binding), N-terminal domain.
       0.671
EAQ40162.3
Hypothetical protein; Aminopeptidase N.
  
     0.645
EAQ37684.1
Hypothetical protein.
  
     0.605
EAQ37778.1
Hypothetical protein.
  
     0.597
AIN49906.1
Hypothetical protein.
  
     0.586
EAQ38094.1
Uncharacterized protein conserved in bacteria.
  
     0.585
EAQ38125.2
Hypothetical protein.
  
     0.578
EAQ38709.1
Hypothetical protein.
  
     0.575
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.