STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ38660.3Hypothetical protein; FOG: TPR repeat. (322 aa)    
Predicted Functional Partners:
EAQ39806.3
Hypothetical protein.
 
     0.770
EAQ38515.1
Hypothetical protein.
  
     0.745
EAQ38988.1
Hypothetical protein.
  
     0.732
EAQ37625.2
Hypothetical protein.
  
     0.709
EAQ39151.2
Hypothetical protein.
  
     0.702
EAQ40036.2
Hypothetical protein.
  
     0.700
EAQ38659.1
Hypothetical protein.
 
     0.689
EAQ37641.1
Glycosyltransferase.
  
     0.666
EAQ39443.1
Hypothetical protein.
  
     0.658
EAQ37816.1
Glycosyltransferase.
  
     0.644
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.