STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsHRibosomal protein S8. (132 aa)    
Predicted Functional Partners:
rpsJ
Ribosomal protein S10.
 
 0.999
rplB
Ribosomal protein L2.
 
 0.999
rpsS
Ribosomal protein S19.
 
 0.999
rpsC
Ribosomal protein S3.
 
 0.999
rplP
Ribosomal protein L16/L10E.
 
 0.999
rpsQ
Ribosomal protein S17.
 
 0.999
rplN
Ribosomal protein L14.
 
 0.999
rplE
Ribosomal protein L5.
 
 0.999
rplF
Ribosomal protein L6P/L9E.
 0.999
rplR
Ribosomal protein L18.
 
 0.999
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.