STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rplRRibosomal protein L18. (118 aa)    
Predicted Functional Partners:
rplV
Ribosomal protein L22.
 
 0.999
rpsH
Ribosomal protein S8.
 
 0.999
rplF
Ribosomal protein L6P/L9E.
 0.999
rpsE
Ribosomal protein S5.
 
 0.999
rpmD
50S ribosomal protein L30.
  
 0.999
rplO
Ribosomal protein L15.
 
 0.999
rplC
Ribosomal protein L3.
 
 0.998
rplW
Ribosomal protein L23.
 
 0.998
rplP
Ribosomal protein L16/L10E.
 
 0.998
rpmC
50S ribosomal protein L29.
  
 0.998
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.