EAQ37772.1 protein (Dokdonia sp. MED134) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EAQ37772.1

PAP2 superfamily protein; Membrane-associated phospholipid phosphatase. (189 aa)

Predicted Functional Partners:

mraY

0.922

uppS

0.919

EAQ38065.1

0.916

bacA

0.912

EAQ37771.1

0.828

EAQ37770.2

0.697

susD7

0.661

menE

0.610

EAQ38502.1

0.590

rplF

0.582

Your Current Organism:

Dokdonia sp. MED134

NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ37770.2	EAQ37771.1	MED134_13451	MED134_13456	Multidrug resistance protein; Na+-driven multidrug efflux pump.	Hypothetical protein.	0.789
EAQ37770.2	EAQ37772.1	MED134_13451	MED134_13461	Multidrug resistance protein; Na+-driven multidrug efflux pump.	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	0.697
EAQ37771.1	EAQ37770.2	MED134_13456	MED134_13451	Hypothetical protein.	Multidrug resistance protein; Na+-driven multidrug efflux pump.	0.789
EAQ37771.1	EAQ37772.1	MED134_13456	MED134_13461	Hypothetical protein.	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	0.828
EAQ37772.1	EAQ37770.2	MED134_13461	MED134_13451	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Multidrug resistance protein; Na+-driven multidrug efflux pump.	0.697
EAQ37772.1	EAQ37771.1	MED134_13461	MED134_13456	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Hypothetical protein.	0.828
EAQ37772.1	EAQ38065.1	MED134_13461	MED134_12881	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	0.916
EAQ37772.1	EAQ38502.1	MED134_13461	MED134_11416	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Cytochrome P450.	0.590
EAQ37772.1	bacA	MED134_13461	MED134_09731	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Undecaprenyl-diphosphatase; Uncharacterized bacitracin resistance protein.	0.912
EAQ37772.1	menE	MED134_13461	MED134_02785	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.	0.610
EAQ37772.1	mraY	MED134_13461	MED134_12711	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.	0.922
EAQ37772.1	rplF	MED134_13461	MED134_12486	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Ribosomal protein L6P/L9E.	0.582
EAQ37772.1	susD7	MED134_13461	MED134_10815	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Outer membrane protein.	0.661
EAQ37772.1	uppS	MED134_13461	MED134_07591	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Undecaprenyl pyrophosphate synthase.	0.919
EAQ38065.1	EAQ37772.1	MED134_12881	MED134_13461	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	0.916
EAQ38065.1	EAQ38502.1	MED134_12881	MED134_11416	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Cytochrome P450.	0.590
EAQ38065.1	bacA	MED134_12881	MED134_09731	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Undecaprenyl-diphosphatase; Uncharacterized bacitracin resistance protein.	0.912
EAQ38065.1	menE	MED134_12881	MED134_02785	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.	0.610
EAQ38065.1	mraY	MED134_12881	MED134_12711	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.	0.907
EAQ38065.1	rplF	MED134_12881	MED134_12486	PAP2 superfamily protein; Membrane-associated phospholipid phosphatase.	Ribosomal protein L6P/L9E.	0.582