STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ37916.1MIP family channel protein; Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family). (218 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase.
  
 
 0.715
EAQ37903.1
Glycerophosphoryl diester phosphodiesterase.
  
 0.589
EAQ40192.1
Hypothetical protein.
   
 
 0.574
ndk
Nucleoside diphosphate kinase.
  
 
 0.542
EAQ37917.1
Hypothetical protein.
       0.528
EAQ39439.1
Aldo/keto reductase family protein; Predicted oxidoreductases (related to aryl- alcohol dehydrogenases).
   
 
 0.524
EAQ38323.1
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
    
 0.475
EAQ37629.2
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family.
    
 0.475
EAQ38508.1
NADP-dependent malate dehydrogenase/phosphate acetyltransferase; Malic enzyme.
  
 
 0.473
EAQ38861.1
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
 0.450
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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