STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
susC59TonB dependent/ligand-gated channel; Outer membrane receptor for Fe3+-dicitrate. (812 aa)    
Predicted Functional Partners:
EAQ37937.1
Imelysin peptidase; Predicted periplasmic lipoprotein.
 
     0.954
EAQ37938.1
Vitamin K-dependent gamma-carboxylase.
 
     0.952
EAQ37936.1
Hypothetical protein.
 
    0.911
EAQ38906.1
Hypothetical protein.
  
 
 0.472
EAQ40407.1
FecR protein; Fe2+-dicitrate sensor, membrane component.
  
 
 0.472
EAQ40464.1
Phage integrase family protein; Site-specific recombinase XerD.
  
     0.435
Your Current Organism:
Dokdonia sp. MED134
NCBI taxonomy Id: 313590
Other names: Cellulophaga sp. MED134, D. sp. MED134, Dokdonia donghaensis MED134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.