STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR11571.1COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the RimK family. (291 aa)    
Predicted Functional Partners:
EAR11570.1
COG4067 Uncharacterized protein conserved in archaea.
 
     0.952
EAR11572.1
Hypothetical protein; COG3608 Predicted deacylase.
     0.951
EAR12658.1
Gamma-glutamyltranspeptidase; COG0405 Gamma-glutamyltransferase.
     
 0.739
EAR13205.1
COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
     
 0.728
EAR12477.1
Aminoacyl-histidine dipeptidase; COG2195 Di- and tripeptidases.
     
 0.715
EAR13400.1
COG0386 Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.615
EAR12310.1
COG0386 Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.615
EAR12229.1
Large subunit of NADH-dependent glutamate synthase; COG0067 Glutamate synthase domain 1.
    
 0.613
EAR11569.1
COG2509 Uncharacterized FAD-dependent dehydrogenases.
       0.592
secF
Putative protein-export transmembrane SecDF protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
    
 0.459
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.