Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAR11608.1COG0860 N-acetylmuramoyl-L-alanine amidase. (363 aa)    
Predicted Functional Partners:
EAR13067.1
Hypothetical protein.
    
   0.775
EAR13256.1
Hemagglutinin; COG1705 Muramidase (flagellum-specific).
    
 0.763
EAR13857.1
Putative peptidase; COG4942 Membrane-bound metallopeptidase.
 
   0.725
EAR11607.1
Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
       0.688
EAR11606.1
COG0247 Fe-S oxidoreductase.
       0.645
EAR13166.1
Hypothetical protein; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
  
 0.641
EAR13824.1
Penicillin-binding protein 1A; COG5009 Membrane carboxypeptidase/penicillin-binding protein.
  
 
 0.603
EAR13859.1
Hypothetical protein.
   
 0.591
EAR11609.1
Hypothetical protein; COG1452 Organic solvent tolerance protein OstA.
       0.589
EAR12041.1
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
  
 0.564
Your Current Organism:
Polaribacter irgensii
NCBI taxonomy Id: 313594
Other names: P. irgensii 23-P, Polaribacter irgensii 23-P
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